论文标题

细胞自动机中形态发生模式的形成

Formation of morphogenetic patterns in cellular automata

论文作者

Rasolonjanahary, Manan'Iarivo, Vasiev, Bakhtier

论文摘要

当代科学,尤其是生物学中,最重要的问题之一是揭示模式形成的机制。在生物组织的水平上,由于细胞之间的相互作用而形成了模式。如果与细胞间接触位点相关时,如果通过扩散分子或短距离介导,这些相互作用可能是远距离的。长距离相互作用的数学研究基于基于微分方程的volve模型,而短距离相互作用是使用离散类型模型建模的。在本文中,我们使用细胞自动机(CA)技术来研究由于短距离相互作用而导致的模式的形成。也就是说,我们使用von neumann蜂窝自动机,该自动机由一组有限的晶格表示,其状态根据过渡规则进化。晶格可以被认为是代表生物细胞(在最简单的情况下,只能在两个不同的状态之一中),而过渡规则由于细胞间接触相互作用而定义了其状态的变化。在此模型中,我们在形成固定周期模式的形成中确定了规则结果。在我们的分析中,我们区分不会破坏预设模式的规则,以及从随机初始条件中导致模式形成的规则。另外,我们检查形成模式是否对噪声有抵抗力,并分析其形成的时间范围。然后根据生物学的模式形成讨论允许形成固定周期性模式的过渡规则。

One of the most important problems in contemporary science, and especially in biology, is to reveal mechanisms of pattern formation. On the level of biological tissues, patterns form due to interactions between cells. These interactions can be long-range if mediated by diffusive molecules or short-range when associated with cell-to-cell contact sites. Mathematical studies of long-range interactions in-volve models based on differential equations while short-range interactions are modelled using discrete type models. In this paper, we use cellular automata (CA) technique to study formation of patterns due to short-range interactions. Namely, we use von Neumann cellular automata represented by a finite set of lattices whose states evolve according to transition rules. Lattices can be considered as representing biological cells (which, in the simplest case, can only be in one of the two different states) while the transition rules define changes in their states due to the cell-to-cell contact interactions. In this model, we identify rules result-ing in the formation of stationary periodic patterns. In our analysis, we distin-guish rules which do not destroy preset patterns and those which cause pattern formation from random initial conditions. Also, we check whether the forming patterns are resistant to noise and analyze the time frame for their formation. Transition rules which allow formation of stationary periodic patterns are then discussed in terms of pattern formation in biology.

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