论文标题

比较不同的尖峰列车同步度量,这些措施涉及其鲁棒性与来自双核诱导癫痫表现活性的错误数据的比较

Comparison of different spike train synchrony measures regarding their robustness to erroneous data from bicuculline induced epileptiform activity

论文作者

Ciba, Manuel, Bestel, Robert, Nick, Christoph, de Arruda, Guilherme Ferraz, Peron, Thomas, Henrique, Comin César, Costa, Luciano da Fontoura, Rodrigues, Francisco Aparecido, Thielemann, Christiane

论文摘要

由于同步活性与基本的大脑功能和病理状态有关,因此尖峰训练同步已成为分析实验性神经元数据的重要措施。已经提出了许多不同的尖峰列车同步度量,但是没有黄金标准可以比较不同实验之间的结果。这项工作旨在提供指导哪种同步度量最适合量化癫痫样诱导物质(例如二瓜氨酸(BIC))在体外神经元尖峰列车数据中的影响。录音中的尖峰火车数据可能会遭受错误的尖峰检测,例如漏洞(假阴性)或噪声(假阳性)。因此,不同的时间尺度依赖性(互相关,相互信息,尖峰时间铺平系数)和时间尺度独立(尖峰对比,相位同步,A-Spike同步,A-ISI距离,A-ISI距离,ARI-Spike-PANCE,ARI-SPIKE-PISTANCE)的同步测量值与稳健性相比,以使其具有稳健的尖峰式尖峰。由于操纵数据中的数据,尖峰对比是唯一对假阴性和假阳性尖峰的唯一措施。分析实验数据集表明,所有度量都能够以统计学意义的方式捕获BIC的效果,即使在低尖峰检测阈值下,尖峰对比度也显示出最高的统计学意义。总而言之,我们建议使用尖峰对比度以补充已建立的同步措施,因为它是时间尺度独立且鲁棒的尖峰列车。

As synchronized activity is associated with basic brain functions and pathological states, spike train synchrony has become an important measure to analyze experimental neuronal data. Many different measures of spike train synchrony have been proposed, but there is no gold standard allowing for comparison of results between different experiments. This work aims to provide guidance on which synchrony measure is best suitable to quantify the effect of epileptiform inducing substances (e.g. bicuculline (BIC)) in in vitro neuronal spike train data. Spike train data from recordings are likely to suffer from erroneous spike detection, such as missed spikes (false negative) or noise (false positive). Therefore, different time-scale dependent (cross-correlation, mutual information, spike time tiling coefficient) and time-scale independent (Spike-contrast, phase synchronization, A-SPIKE-synchronization, A-ISI-distance, ARI-SPIKE-distance) synchrony measures were compared in terms of their robustness to erroneous spike trains. As a result of the in silico manipulated data, Spike-contrast was the only measure being robust to false negative as well as false-positive spikes. Analyzing the experimental data set revealed that all measures were able to capture the effect of BIC in a statistically significant way, with Spike-contrast showing the highest statistical significance even at low spike detection thresholds. In summary, we suggest the usage of Spike-contrast to complement established synchrony measures, as it is time scale independent and robust to erroneous spike trains.

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