论文标题
DNA碱基中的电子传输:Geant4-DNA蒙特卡洛工具包的扩展
Electron transport in DNA bases: An extension of the Geant4-DNA Monte Carlo toolkit
论文作者
论文摘要
这项工作的目的是扩展Geant4-DNA蒙特卡洛工具包,以使用最近在Geant-DNA CPA100型号中实施的一组横截面与四个DNA碱基的电子相互作用,并用于液态水。在四个DNA碱,胸腺氨酸,鸟嘌呤和胞嘧啶中计算了用于弹性散射,电离和电子激发的电子相互作用截面。电子能量范围扩展到包括相对论电子。弹性散射横截面是使用独立的原子模型计算出的,该模型的振幅从ElsePA代码得出。相对论二进制遇到的伯特·弗里恩斯模型用于计算电离横截面。电子激发横截面计算基于与CPA100代码中使用的相同策略的水横截面。这些是在Geant4-DNA选项6物理构造中实现的,以扩展其在液态水中除了在DNA材料中跟踪电子的能力。由于DNA核碱基的分子结构与水具有不同的分子结构,因此进行更准确的模拟很重要,特别是因为DNA被认为是细胞中最放射敏感的结构。差异和集成的横截面计算与所有DNA碱基的文献数据非常吻合。使用Geant4-DNA选项的新扩展6在四个DNA碱基中停止功率,范围和非弹性平均自由路径计算与其他研究的计算非常吻合,尤其是对于高能量电子。一些偏差显示在低电子能量范围,这可能归因于不同的相互作用模型。与水模拟的比较显示出明显的差异,这强调了在轨道结构中包括DNA底部横截面的必要性,以更好地估算对生物材料的辐射影响。
The purpose of this work is to extend the Geant4-DNA Monte Carlo toolkit to include electron interactions with the four DNA bases using a set of cross sections recently implemented in Geant-DNA CPA100 models and available for liquid water. Electron interaction cross sections for elastic scattering, ionisation, and electronic excitation were calculated in the four DNA bases adenine, thymine, guanine and cytosine. The electron energy range is extended to include relativistic electrons. Elastic scattering cross sections were calculated using the independent atom model with amplitude derived from ELSEPA code. Relativistic Binary Encounter Bethe Vriens model was used to calculate ionisation cross sections. The electronic excitation cross sections calculations were based on the water cross sections following the same strategy used in CPA100 code. These were implemented within the Geant4-DNA option6 physics constructor to extend its capability of tracking electrons in DNA material in addition to liquid water. Since DNA nucleobases have different molecular structure than water it is important to perform more accurate simulations especially because DNA is considered the most radiosensitive structure in cells. Differential and integrated cross sections calculations were in good agreement with data from the literature for all DNA bases. Stopping power, range and inelastic mean free path calculations in the four DNA bases using this new extension of Geant4-DNA option6 are in good agreement with calculations done by other studies, especially for high energy electrons. Some deviations are shown at the low electron energy range, which could be attributed to the different interaction models. Comparison with water simulations shows obvious difference which emphasizes the need to include DNA bases cross sections in track structure codes for better estimation of radiation effects on biological material.