论文标题
化学热力学生长系统
Chemical Thermodynamics for Growing Systems
论文作者
论文摘要
我们认为正在增长的开放化学反应系统(CRS),其中自催化化学反应被封装在有限的体积中,其大小可以与反应结合发生变化。生长的CRS的热力学是通过阐明其增长状态的身体状况和成本来理解生物细胞和设计原核细胞所必不可少的。在这项工作中,我们通过扩展非生长CRS的Hessian几何结构来建立一种热力学理论,以增长CRS。该理论提供了确定不断增长的CRS命运的环境条件。生长,收缩或平衡。我们还确定热力学约束;一个是限制不断增长的CRS的可能状态,而另一个则进一步限制可能存在非平衡稳定状态的区域。此外,我们评估了稳定增长状态下的熵产量。不断增长的非平衡状态起源于热力学的扩展,这与常规的非平衡状态不同。这些结果源自一般的热力学考虑因素,而没有假设任何特定的热力学潜力或反应动力学。即,它们仅基于热力学的第二定律获得。
We consider growing open chemical reaction systems (CRSs), in which autocatalytic chemical reactions are encapsulated in a finite volume and its size can change in conjunction with the reactions. The thermodynamics of growing CRSs is indispensable for understanding biological cells and designing protocells by clarifying the physical conditions and costs for their growing states. In this work, we establish a thermodynamic theory of growing CRSs by extending the Hessian geometric structure of non-growing CRSs. The theory provides the environmental conditions to determine the fate of the growing CRSs; growth, shrinking or equilibration. We also identify thermodynamic constraints; one to restrict the possible states of the growing CRSs and the other to further limit the region where a nonequilibrium steady growing state can exist. Moreover, we evaluate the entropy production rate in the steady growing state. The growing nonequilibrium state has its origin in the extensivity of thermodynamics, which is different from the conventional nonequilibrium states with constant volume. These results are derived from general thermodynamic considerations without assuming any specific thermodynamic potentials or reaction kinetics; i.e., they are obtained based solely on the second law of thermodynamics.