论文标题
对胸部CT的肝脂肪变性进行深度学习的评估
Deep Learning-based Assessment of Hepatic Steatosis on chest CT
论文作者
论文摘要
目的:早期检测肝脂肪变性需要自动方法,以避免发展为肝硬化和癌症。在这里,我们开发了一条完全自动化的深度学习管道,以量化非对比度增强胸部计算机断层扫描(CT)扫描的肝脂肪变性。材料和方法:我们在1,431个随机选择的国家肺筛查试验(NLST)参与者的胸部CT图像上开发和评估了我们的管道。 451 CT扫描的数据集和专家读者的体积分段用于培训深度学习模型。为了进行测试,在980 CT扫描的独立数据集中,通过选择三个感兴趣的圆形区域,由专家读取器手动测量肝衰减的三个横截面图像。此外,专家读者将100个随机选择的测试集案例进行了分割。测试集中的肝脂肪变性被定义为<40 Hounsfield单位的平均肝衰减。进行了Spearman相关性以分析肝脏脂肪定量精度,并计算出Cohen的Kappa系数,以用于肝脂肪变性预测可靠性。结果:我们的管道表现出强大的性能,并达到了体积肝分割的平均骰子得分为0.970。在自动读取器和专家读取器测量之间,肝脏脂肪定量的长矛人相关性为0.954(p <0.0001)。 Cohen的Kappa系数为0.875,用于自动评估肝脂肪变性。结论:我们开发了一条全自动的基于深度学习的管道,用于评估胸部CT图像中肝脂肪变性。随着肝脂肪变性的快速筛查,我们的管道有可能帮助采取预防措施,以避免肝硬化和癌症发展。
Purpose: Automatic methods are required for the early detection of hepatic steatosis to avoid progression to cirrhosis and cancer. Here, we developed a fully automated deep learning pipeline to quantify hepatic steatosis on non-contrast enhanced chest computed tomography (CT) scans. Materials and Methods: We developed and evaluated our pipeline on chest CT images of 1,431 randomly selected National Lung Screening Trial (NLST) participants. A dataset of 451 CT scans with volumetric liver segmentations of expert readers was used for training a deep learning model. For testing, in an independent dataset of 980 CT scans hepatic attenuation was manually measured by an expert reader on three cross-sectional images at different hepatic levels by selecting three circular regions of interest. Additionally, 100 randomly selected cases of the test set were volumetrically segmented by expert readers. Hepatic steatosis on the test set was defined as mean hepatic attenuation of < 40 Hounsfield unit. Spearman correlation was conducted to analyze liver fat quantification accuracy and the Cohen's Kappa coefficient was calculated for hepatic steatosis prediction reliability. Results: Our pipeline demonstrated strong performance and achieved a mean dice score of 0.970 for the volumetric liver segmentation. The spearman correlation of the liver fat quantification was 0.954 (P <0.0001) between the automated and expert reader measurements. The cohen's kappa coefficient was 0.875 for automatic assessment of hepatic steatosis. Conclusion: We developed a fully automatic deep learning-based pipeline for the assessment of hepatic steatosis in chest CT images. With the fast and cheap screening of hepatic steatosis, our pipeline has the potential to help initiate preventive measures to avoid progression to cirrhosis and cancer.