论文标题

BFRNET:一种基于深度学习的MR背景删除方法,用于大脑的QSM,其中包含重要的病理易感性来源

BFRnet: A deep learning-based MR background field removal method for QSM of the brain containing significant pathological susceptibility sources

论文作者

Zhu, Xuanyu, Gao, Yang, Liu, Feng, Crozier, Stuart, Sun, Hongfu

论文摘要

简介:背景场去除(BFR)是成功定量易感映射(QSM)所需的关键步骤。然而,由于这些病理易感性来源引起的相对较大的领域,消除包含重要敏感性来源的大脑中的背景场(例如颅内出血)。方法:本研究提出了一种新的基于深度学习的方法BFRNET,以消除健康和出血学科中的背景领域。该网络是由U-NET体系结构上的双频八度卷积构建的,该架构训练了包含重要敏感性来源的合成场图。将BFRNET方法与三种常规BFR方法和一种先前的深度学习方法进行了比较,并使用来自4个健康和2个出血学科的体内大脑进行了模拟和体内大脑。还研究了针对获取视野(FOV)方向和脑掩蔽的鲁棒性。结果:对于模拟和体内实验,BFRNET在局部磁场和QSM结果中取得了最佳的视觉吸引力,并且在所有五种方法中,最小对比度损失和最准确的出血易感性测量结果。此外,BFRNET产生了不同尺寸的脑面膜之间最一致的局部场和敏感性图,而常规方法则极大地取决于精确的大脑提取和进一步的脑边缘侵蚀。还可以观察到,BFRNET在所有BFR方法中均采取了最佳的采集方法,以倾斜到主磁场。结论:与常规BFR算法相比,提出的BFRNET提高了出血受试者中局部场重建的准确性。 BFRNET方法可有效地获取标题的方向,并在传统BFR方法经常要求的情况下保留无边缘侵蚀的全脑。

Introduction: Background field removal (BFR) is a critical step required for successful quantitative susceptibility mapping (QSM). However, eliminating the background field in brains containing significant susceptibility sources, such as intracranial hemorrhages, is challenging due to the relatively large scale of the field induced by these pathological susceptibility sources. Method: This study proposes a new deep learning-based method, BFRnet, to remove background field in healthy and hemorrhagic subjects. The network is built with the dual-frequency octave convolutions on the U-net architecture, trained with synthetic field maps containing significant susceptibility sources. The BFRnet method is compared with three conventional BFR methods and one previous deep learning method using simulated and in vivo brains from 4 healthy and 2 hemorrhagic subjects. Robustness against acquisition field-of-view (FOV) orientation and brain masking are also investigated. Results: For both simulation and in vivo experiments, BFRnet led to the best visually appealing results in the local field and QSM results with the minimum contrast loss and the most accurate hemorrhage susceptibility measurements among all five methods. In addition, BFRnet produced the most consistent local field and susceptibility maps between different sizes of brain masks, while conventional methods depend drastically on precise brain extraction and further brain edge erosions. It is also observed that BFRnet performed the best among all BFR methods for acquisition FOVs oblique to the main magnetic field. Conclusion: The proposed BFRnet improved the accuracy of local field reconstruction in the hemorrhagic subjects compared with conventional BFR algorithms. The BFRnet method was effective for acquisitions of titled orientations and retained whole brains without edge erosion as often required by traditional BFR methods.

扫码加入交流群

加入微信交流群

微信交流群二维码

扫码加入学术交流群,获取更多资源