论文标题

使用近似高斯过程的密度功能理论模拟快速仿真

Fast emulation of density functional theory simulations using approximate Gaussian processes

论文作者

Stetzler, Steven, Grosskopf, Michael, Lawrence, Earl

论文摘要

使用马尔可夫链蒙特卡洛(Monte Carlo)以贝叶斯方式将理论模型拟合到实验数据中,通常需要一个评估数千(或数百万)型的型号。当该模型是慢速到计算的物理模拟时,贝叶斯模型拟合就变得不可行。为了解决这个问题,可以使用模拟输出(模拟器”的第二个统计模型来代替模型拟合期间的完整仿真。选择的典型仿真器是高斯过程(GP),这是一种灵活的非线性模型,在每个输入点都提供了预测均值和方差。高斯流程回归对少量培训数据($ n <10^3 $)非常有效,但是当数据集大小变大时,训练和用于预测的速度慢。可以使用各种方法来加快高斯流程,以中等至一大的数据集制度($ n> 10^5 $),以大幅度降低运行时的预测准确性。这项工作研究了几种近似高斯过程模型的准确度折衷 - 稀疏的变分GP,随机变异GP和深内核学习的GP - 在模拟密度功能理论(DFT)模型的预测时。此外,我们使用模拟器以贝叶斯的方式校准了使用观察到的数据的DFT模型参数,从而解决了数据集大小所施加的计算屏障,并将校准结果与先前的工作进行比较。这些校准的DFT模型的实用性是根据观察到的数据对实验意义的核素的性质进行预测,例如超重核。

Fitting a theoretical model to experimental data in a Bayesian manner using Markov chain Monte Carlo typically requires one to evaluate the model thousands (or millions) of times. When the model is a slow-to-compute physics simulation, Bayesian model fitting becomes infeasible. To remedy this, a second statistical model that predicts the simulation output -- an "emulator" -- can be used in lieu of the full simulation during model fitting. A typical emulator of choice is the Gaussian process (GP), a flexible, non-linear model that provides both a predictive mean and variance at each input point. Gaussian process regression works well for small amounts of training data ($n < 10^3$), but becomes slow to train and use for prediction when the data set size becomes large. Various methods can be used to speed up the Gaussian process in the medium-to-large data set regime ($n > 10^5$), trading away predictive accuracy for drastically reduced runtime. This work examines the accuracy-runtime trade-off of several approximate Gaussian process models -- the sparse variational GP, stochastic variational GP, and deep kernel learned GP -- when emulating the predictions of density functional theory (DFT) models. Additionally, we use the emulators to calibrate, in a Bayesian manner, the DFT model parameters using observed data, resolving the computational barrier imposed by the data set size, and compare calibration results to previous work. The utility of these calibrated DFT models is to make predictions, based on observed data, about the properties of experimentally unobserved nuclides of interest e.g. super-heavy nuclei.

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